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	Systematic Name	Gene Name	Is a Complex?	DBD	Shown DNA-binding?	#Motifs in Collection

V	MAL63		n	Zinc cluster	1	1
V	MATA1		n	Homeodomain	0	4
V	MATA1-MATALPHA2-dimer	a1-alpha2-dimer	y	Homeodomain	1	3
V	MATALPHA1-MCM1-dimer	alpha1-MCM1-dimer	y	MADS box,MATalpha1		1
V	MBP1-SWI6-dimer	MBP1-SWI6-dimer	y	APSES	0	1
V	Oaf1-Pip2-dimer	Oaf1-Pip2-dimer	y	Zinc cluster	0	1
V	Q0010		n			0
V	Q0017		n			0
V	Q0032		n			0
V	Q0045	COX1	n			0
V	Q0050	AI1	n			0
V	Q0055	AI2	n			0
V	Q0060	AI3	n			0
V	Q0065	AI4	n			0
V	Q0070	AI5_ALPHA	n			0
V	Q0075	AI5_BETA	n			0
V	Q0080	ATP8	n			0
V	Q0085	ATP6	n			0
V	Q0092		n			0
V	Q0105	COB	n			0
V	Q0110	BI2	n			0
V	Q0115	BI3	n			0
V	Q0120	BI4	n			0
V	Q0130	OLI1	n			0
V	Q0140	VAR1	n			0
V	Q0142		n			0
V	Q0143		n			0
V	Q0144		n			0
V	Q0160	SCEI	n			0
V	Q0182		n			0
V	Q0250	COX2	n			0
V	Q0255		n			0
V	Q0275	COX3	n			0
V	Q0297		n			0
V	R0010W	FLP1	n			0
V	R0020C	REP1	n			0
V	R0030W	RAF1	n			0
V	R0040C	REP2	n			0
V	TBP-TFIIA	TBP-TFIIA	y		1	1
V	TBP-TFIIA-TFIIB	TBP-TFIIA-TFIIB	y		1	1
V	TBP-TFIIB	TBP-TFIIB	y		1	1
V	TFIIIC	TFIIIC	y		0	1
V	YAL001C	TFC3	n			0
V	YAL002W	VPS8	n			0
V	YAL003W	EFB1	n			0
V	YAL004W		n			0
V	YAL005C	SSA1	n			0
V	YAL007C	ERP2	n			0
V	YAL008W	FUN14	n			0
V	YAL009W	SPO7	n			0
V	YAL010C	MDM10	n			0
V	YAL011W	SWC3	n			0
V	YAL012W	CYS3	n			0
V	YAL013W	DEP1	n			0
V	YAL014C	SYN8	n			0
V	YAL015C	NTG1	n			0
V	YAL016C-A		n			0
V	YAL016C-B		n			0
V	YAL016W	TPD3	n			0
V	YAL017W	PSK1	n			0
V	YAL018C		n			0
V	YAL019W	FUN30	n			0
V	YAL019W-A		n			0
V	YAL020C	ATS1	n			0
V	YAL021C	CCR4	n			0
V	YAL022C	FUN26	n			0
V	YAL023C	PMT2	n			0
V	YAL024C	LTE1	n			0
V	YAL025C	MAK16	n			0
V	YAL026C	DRS2	n			0
V	YAL026C-A		n			0
V	YAL027W	SAW1	n			0
V	YAL028W	FRT2	n			0
V	YAL029C	MYO4	n			0
V	YAL030W	SNC1	n			0
V	YAL031C	GIP4	n			0
V	YAL031W-A		n			0
V	YAL032C	PRP45	n			0
V	YAL033W	POP5	n			0
V	YAL034C	FUN19	n			0
V	YAL034C-B		n			0
V	YAL034W-A	MTW1	n			0
V	YAL035W	FUN12	n			0
V	YAL036C	RBG1	n			0
V	YAL037C-A		n			0
V	YAL037C-B		n			0
V	YAL037W		n			0
V	YAL038W	CDC19	n			0
V	YAL039C	CYC3	n			0
V	YAL040C	CLN3	n			0
V	YAL041W	CDC24	n			0
V	YAL042C-A		n			0
V	YAL042W	ERV46	n			0
V	YAL043C	PTA1	n			0
V	YAL044C	GCV3	n			0
V	YAL044W-A		n			0
V	YAL045C		n			0
V	YAL046C	AIM1	n			0
V	YAL047C	SPC72	n			0
V	YAL047W-A		n			0

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