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	Systematic Name	Gene Name	Is a Complex?	DBD	Shown DNA-binding?	#Motifs in Collection

V	MAL63		n	Zinc cluster	1	1
V	MATA1-MATALPHA2-dimer	a1-alpha2-dimer	y	Homeodomain	1	3
V	TBP-TFIIA	TBP-TFIIA	y		1	1
V	TBP-TFIIA-TFIIB	TBP-TFIIA-TFIIB	y		1	1
V	TBP-TFIIB	TBP-TFIIB	y		1	1
V	YAL051W	OAF1	n	Zinc cluster	1	7
V	YBL005W	PDR3	n	Zinc cluster	1	14
V	YBL054W	TOD6	n	Myb/SANT	1	5
V	YBL103C	RTG3	n	bHLH	1	16
V	YBR033W	EDS1	n	Zinc cluster	1	4
V	YBR049C	REB1	n	MADF	1	17
V	YBR066C	NRG2	n	C2H2 ZF	1	4
V	YBR083W	TEC1	n	TEA	1	16
V	YBR089C-A	NHP6B	n	Sox	1	3
V	YBR150C	TBS1	n	Zinc cluster	1	5
V	YBR182C	SMP1	n	MADS box	1	9
V	YBR239C	ERT1	n	Zinc cluster	1	4
V	YBR267W	REI1	n	C2H2 ZF	1	2
V	YCL058C	FYV5	n		1	1
V	YCL067C	HMLALPHA2	n	Homeodomain	1	2
V	YCR018C	SRD1	n	GATA	1	6
V	YCR039C	MATALPHA2	n	Homeodomain	1	9
V	YCR040W	MATALPHA1	n	MATalpha1	1	1
V	YCR065W	HCM1	n	Forkhead	1	2
V	YCR096C	HMRA2	n	Homeodomain	1	1
V	YCR106W	RDS1	n	Zinc cluster	1	11
V	YDL020C	RPN4	n	C2H2 ZF	1	17
V	YDL048C	STP4	n	C2H2 ZF	1	6
V	YDL056W	MBP1	n	APSES	1	18
V	YDL106C	PHO2	n	Homeodomain	1	17
V	YDL170W	UGA3	n	Zinc cluster	1	12
V	YDR034C	LYS14	n	Zinc cluster	1	4
V	YDR043C	NRG1	n	C2H2 ZF	1	14
V	YDR096W	GIS1	n	C2H2 ZF,C2H2 ZF	1	3
V	YDR146C	SWI5	n	C2H2 ZF,C2H2 ZF,C2H2 ZF	1	10
V	YDR169C	STB3	n		1	2
V	YDR207C	UME6	n	Zinc cluster	1	14
V	YDR213W	UPC2	n	Zinc cluster	1	6
V	YDR216W	ADR1	n	C2H2 ZF	1	10
V	YDR253C	MET32	n	C2H2 ZF	1	14
V	YDR259C	YAP6	n	bZIP	1	13
V	YDR303C	RSC3	n	Zinc cluster	1	3
V	YDR310C	SUM1	n	AT hook	1	14
V	YDR421W	ARO80	n	Zinc cluster	1	10
V	YDR423C	CAD1	n	bZIP	1	18
V	YDR451C	YHP1	n	Homeodomain	1	6
V	YDR463W	STP1	n	C2H2 ZF	1	9
V	YDR520C	URC2	n	Zinc cluster	1	6
V	YEL009C	GCN4	n	bZIP	1	20
V	YER028C	MIG3	n	C2H2 ZF	1	5
V	YER040W	GLN3	n	GATA	1	14
V	YER064C		n	VHR1	1	2
V	YER068W	MOT2	n	RRM	1	5
V	YER069W	ARG5,6	n		1	1
V	YER088C	DOT6	n	Myb/SANT	1	6
V	YER111C	SWI4	n	APSES	1	27
V	YER130C	COM2	n	C2H2 ZF,C2H2 ZF	1	6
V	YER148W	SPT15	n	TBP	1	5
V	YER169W	RPH1	n	C2H2 ZF	1	15
V	YER184C		n	Zinc cluster	1	4
V	YFL021W	GAT1	n	GATA	1	18
V	YFL031W	HAC1	n	bZIP	1	8
V	YFR034C	PHO4	n	bHLH	1	19
V	YGL013C	PDR1	n	Zinc cluster	1	18
V	YGL035C	MIG1	n	C2H2 ZF	1	12
V	YGL071W	AFT1	n	AFT	1	19
V	YGL073W	HSF1	n	HSF	1	16
V	YGL096W	TOS8	n	Homeodomain	1	2
V	YGL162W	SUT1	n	Zinc cluster	1	5
V	YGL166W	CUP2	n	Copper fist	1	3
V	YGL209W	MIG2	n	C2H2 ZF	1	8
V	YGL254W	FZF1	n	C2H2 ZF	1	6
V	YGR044C	RME1	n	C2H2 ZF	1	6
V	YGR067C		n	C2H2 ZF	1	4
V	YGR249W	MGA1	n	HSF	1	6
V	YHL009C	YAP3	n	bZIP	1	11
V	YHL027W	RIM101	n	C2H2 ZF	1	9
V	YHR006W	STP2	n	C2H2 ZF	1	8
V	YHR056C	RSC30	n	Zinc cluster	1	3
V	YHR084W	STE12	n	STE	1	41
V	YHR124W	NDT80	n	Ndt80/PhoG	1	9
V	YHR178W	STB5	n	Zinc cluster	1	13
V	YHR206W	SKN7	n	HSF	1	21
V	YIL036W	CST6	n	bZIP	1	8
V	YIL056W	VHR1	n	VHR1	1	2
V	YIL101C	XBP1	n	APSES	1	9
V	YIL130W	ASG1	n	Zinc cluster,Zinc cluster	1	3
V	YIL131C	FKH1	n	Forkhead	1	15
V	YIR013C	GAT4	n	GATA	1	4
V	YJL056C	ZAP1	n	C2H2 ZF,C2H2 ZF,C2H2 ZF	1	8
V	YJL089W	SIP4	n	Zinc cluster	1	15
V	YJL103C	GSM1	n	Zinc cluster	1	5
V	YJL110C	GZF3	n	GATA	1	13
V	YJL127C	SPT10	n	C2H2 ZF	1	2
V	YJR060W	CBF1	n	bHLH	1	23
V	YJR127C	RSF2	n	C2H2 ZF	1	4
V	YKL015W	PUT3	n	Zinc cluster	1	16
V	YKL038W	RGT1	n	Zinc cluster	1	11
V	YKL043W	PHD1	n	APSES	1	11
V	YKL062W	MSN4	n	C2H2 ZF	1	14

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