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Reference Year Description PMID #Motifs in DB
V Zhu J, Zhang MQ. SCPD: a promoter database of the yeast Saccharomyces cerevisiae. Bioinformatics. 1999 Jul-Aug;15(7-8):607-11. 1999 alignments of various mapped sites 10487868 20
V Zhu G, Spellman PT, Volpe T, Brown PO, Botstein D, Davis TN, Futcher B. Two yeast forkhead genes regulate the cell cycle and pseudohyphal growth. Nature. 2000 Jul 6;406(6791):90-4. 2000 SAAB, ChIP 10894548 2
V Zhu G, Spellman PT, Volpe T, Brown PO, Botstein D, Davis TN, Futcher B. Two yeast forkhead genes regulate the cell cycle and pseudohyphal growth. Nature. 2000 Jul 6;406(6791):90-4. 2000 SAAB 10894548 1
V Zhu G, Davis TN. The fork head transcription factor Hcm1p participates in the regulation of SPC110, which encodes the calmodulin-binding protein in the yeast spindle pole body. Biochim Biophys Acta. 1998 Dec 10;1448(2):236-44. 1998 SAAB, EMSA 9920414 1
V Zhu C, Byers KJ, McCord RP, Shi Z, Berger MF, Newburger DE, Saulrieta K, Smith Z, Shah MV, Radhakrishnan M, Philippakis AA, Hu Y, De Masi F, Pacek M, Rolfs A, Murthy T, Labaer J, Bulyk ML. High-resolution DNA-binding specificity analysis of yeast transcription factors. Genome Res. 2009 Apr;19(4):556-66. Epub 2009 Jan 21. 2009 PBM 19158363 89
V Zhong H, Vershon AK. The yeast homeodomain protein MATalpha2 shows extended DNA binding specificity in complex with Mcm1. J Biol Chem. 1997 Mar 28;272(13):8402-9. 1997 Mutational analysis 9079665 1
V Zhao Y, Granas D, Stormo GD. Inferring binding energies from selected binding sites. PLoS Comput Biol. 2009 Dec;5(12):e1000590. Epub 2009 Dec 4. 2009 PBM 19997485 132
V Zhao H, Butler E, Rodgers J, Spizzo T, Duesterhoeft S, Eide D. Regulation of zinc homeostasis in yeast by binding of the ZAP1 transcriptional activator to zinc-responsive promoter elements. J Biol Chem. 1998 Oct 30;273(44):28713-20. 1998 EMSA, DNase protection, site-turns-on-gene 9786867 1
V Zaim J, Speina E, Kierzek AM. Identification of new genes regulated by the Crt1 transcription factor, an effector of the DNA damage checkpoint pathway in Saccharomyces cerevisiae. J Biol Chem. 2005 Jan 7;280(1):28-37. Epub 2004 Oct 19. 2005 microarray enrichment, and motif finding among 5 known binding sites 15494396 2
V Yoshimoto H, Saltsman K, Gasch AP, Li HX, Ogawa N, Botstein D, Brown PO, Cyert MS. Genome-wide analysis of gene expression regulated by the calcineurin/Crz1p signaling pathway in Saccharomyces cerevisiae. J Biol Chem. 2002 Aug 23;277(34):31079-88. Epub 2002 Jun 10. 2002 Expression enrichment by microarray, and SELEX 12058033 2
V Yamamoto A, Mizukami Y, Sakurai H. Identification of a novel class of target genes and a novel type of binding sequence of heat shock transcription factor in Saccharomyces cerevisiae. J Biol Chem. 2005 Mar 25;280(12):11911-9. Epub 2005 Jan 11. 2005 microArray Enrichment 15647283 1
V Xie J, Pierce M, Gailus-Durner V, Wagner M, Winter E, Vershon AK. Sum1 and Hst1 repress middle sporulation-specific gene expression during mitosis in Saccharomyces cerevisiae. EMBO J. 1999 Nov 15;18(22):6448-54. 1999 EMSA, site-turns-on-gene 10562556 1
V Wysocki R, Fortier PK, Maciaszczyk E, Thorsen M, Leduc A, Odhagen A, Owsianik G, Ulaszewski S, Ramotar D, Tamás MJ. Transcriptional activation of metalloid tolerance genes in Saccharomyces cerevisiae requires the AP-1-like proteins Yap1p and Yap8p. Mol Biol Cell. 2004 May;15(5):2049-60. Epub 2004 Feb 20. 2004 ChIP, expression enrichment 14978214 1
V Williams RM, Primig M, Washburn BK, Winzeler EA, Bellis M, Sarrauste de Menthiere C, Davis RW, Esposito RE. The Ume6 regulon coordinates metabolic and meiotic gene expression in yeast. Proc Natl Acad Sci U S A. 2002 Oct 15;99(21):13431-6. Epub 2002 Oct 7. 2002 alignments of various sites under same control 12370439 1
V Wieland G, Hemmerich P, Koch M, Stoyan T, Hegemann J, Diekmann S. Determination of the binding constants of the centromere protein Cbf1 to all 16 centromere DNAs of Saccharomyces cerevisiae. Nucleic Acids Res. 2001 Mar 1;29(5):1054-60. 2001 EMSA, kinetic analysis 11222754 1

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